transphire
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
A
abort_finished() (transphire.mainwindow.MainWindow method)
accept_apply() (transphire.loadwindow.DefaultSettings method)
activate_tab() (transphire.plotcontainer.PlotContainer method)
add_canvas() (transphire.plotwidget.PlotWidget method)
add_email() (transphire.notificationcontainer.NotificationContainer method)
add_exceptions() (transphire.notificationwidget.NotificationWidget method)
add_save() (transphire.mountworker.MountWorker method)
add_tab() (transphire.loadwindow.DefaultSettings method)
(transphire.logviewerdialog.LogViewerDialog method)
(transphire.tabdocker.TabDocker method)
add_tabs() (transphire.loadwindow.DefaultSettings method)
add_template() (transphire.templatedialog.TemplateDialog method)
add_to_layout() (transphire.plotcontainer.TwinContainer method)
add_to_queue() (transphire.processthread.ProcessThread method)
add_to_queue_file() (transphire.processthread.ProcessThread method)
add_widget() (transphire.framecontainer.FrameContainer method)
(transphire.loadcontentcontainer.LoadContentContainer method)
all_in_queue_file() (transphire.processthread.ProcessThread method)
already_in_queue_file() (transphire.processthread.ProcessThread method)
already_in_translation_file() (transphire.processthread.ProcessThread method)
append_to_translate() (transphire.processthread.ProcessThread method)
append_values() (transphire.transphire_utils.DataFrame method)
appendPlainText() (transphire.logviewer.LogViewer method)
assign_latest() (transphire.tabdocker.TabDocker method)
C
calculate_array() (transphire.plotworker.PlotWorker method)
calculate_array_now() (transphire.plotworker.PlotWorker static method)
calculate_df_quota() (transphire.mountcalculator.MountCalculator method)
calculate_get_quota() (transphire.mountcalculator.MountCalculator method)
calculate_ssh_quota() (transphire.mountcalculator.MountCalculator method)
change_color_if_true() (transphire.settingswidget.SettingsWidget method)
change_info_name() (transphire.statuswidget.StatusWidget method)
change_info_quota() (transphire.statuswidget.StatusWidget method)
change_state() (transphire.logviewer.LogViewer method)
(transphire.settingscontainer.SettingsContainer method)
change_tooltip() (transphire.notificationwidget.NotificationWidget method)
(transphire.settingswidget.SettingsWidget method)
check_connection() (transphire.mountworker.MountWorker method)
(transphire.processthread.ProcessThread method)
check_enable() (transphire.plotwidget.SelectWidget method)
check_existence() (in module transphire.mountworker)
check_for_outlier() (in module transphire.transphire_software)
check_full() (transphire.processthread.ProcessThread method)
check_if_mounted() (transphire.processthread.ProcessThread static method)
check_instance() (in module transphire.transphire_utils)
check_modified_widgets() (transphire.loadwindow.DefaultSettings method)
check_nr_frames() (in module transphire.transphire_software)
check_outputs() (in module transphire.transphire_software)
check_queue() (transphire.processworker.ProcessWorker method)
check_queue_files() (transphire.processthread.ProcessThread method)
check_quota() (transphire.mainwindow.MainWindow method)
(transphire.processthread.ProcessThread method)
check_ready_for_copy() (transphire.processthread.ProcessThread method)
choose_template() (transphire.templatedialog.TemplateDialog method)
clear_canvas() (transphire.plotwidget.PlotWidget method)
clear_combo() (transphire.notificationwidget.NotificationWidget method)
clear_tabs() (transphire.loadwindow.DefaultSettings method)
closeEvent() (transphire.loadwindow.DefaultSettings method)
(transphire.mainwindow.MainWindow method)
combine_ctf_outputs() (in module transphire.transphire_ctf)
combine_motion_outputs() (in module transphire.transphire_motion)
continue_dialog() (transphire.mainwindow.MainWindow method)
contrast_to_shift() (in module transphire.transphire_ctf)
copy() (in module transphire.transphire_utils)
copy_as_another_user() (transphire.processthread.ProcessThread method)
copy_as_user() (transphire.processthread.ProcessThread method)
copy_extern() (transphire.processthread.ProcessThread method)
copy_from_template() (transphire.loadcontentcontainer.LoadContentContainer method)
copy_template() (transphire.templatedialog.TemplateDialog method)
copytree() (in module transphire.transphire_utils)
count() (transphire.tabdocker.TabDocker method)
create_box() (in module transphire.transphire_picking)
create_cinderella_0_3_1_command() (in module transphire.transphire_select2d)
create_circle() (in module transphire.transphire_picking)
create_class2d_command() (in module transphire.transphire_class2d)
create_combines() (transphire.processthread.ProcessThread method)
create_cryolo_v1_0_4_command() (in module transphire.transphire_picking)
create_cryolo_v1_1_0_command() (in module transphire.transphire_picking)
create_cryolo_v1_4_1_command() (in module transphire.transphire_picking)
create_cter_1_0_command() (in module transphire.transphire_ctf)
create_cter_1_3_command() (in module transphire.transphire_ctf)
create_ctffind_4_v4_1_13_command() (in module transphire.transphire_ctf)
create_ctffind_4_v4_1_8_command() (in module transphire.transphire_ctf)
create_eval_command() (in module transphire.transphire_train2d)
create_export_data() (in module transphire.transphire_ctf)
(in module transphire.transphire_motion)
create_filter_command() (in module transphire.transphire_picking)
create_gctf_v1_06_command() (in module transphire.transphire_ctf)
create_initial_tabs() (transphire.loadwindow.DefaultSettings method)
create_isac2_1_2_combine_command() (in module transphire.transphire_class2d)
create_isac2_1_2_command() (in module transphire.transphire_class2d)
create_log() (in module transphire.transphire_utils)
create_motion_cor_2_v1_0_0_command() (in module transphire.transphire_motion)
create_restack_command() (in module transphire.transphire_train2d)
create_stack_combine_command() (in module transphire.transphire_class2d)
create_substack_command() (in module transphire.transphire_train2d)
create_sum_movie_command() (in module transphire.transphire_motion)
create_sum_movie_v1_0_2_command() (in module transphire.transphire_motion)
create_train_command() (in module transphire.transphire_train2d)
create_unblur_v1_0_0_command() (in module transphire.transphire_motion)
create_window_1_2_command() (in module transphire.transphire_extract)
currentIndex() (transphire.tabdocker.TabDocker method)
D
DataFrame (class in transphire.transphire_utils)
default_auto_sphire_v1_3() (in module transphire.transphire_content)
default_cinderella_v0_3_1() (in module transphire.transphire_content)
default_compress_command_line() (in module transphire.transphire_content)
default_copy() (in module transphire.transphire_content)
default_cryolo_train_v1_5_4() (in module transphire.transphire_content)
default_cryolo_train_v1_5_8() (in module transphire.transphire_content)
default_cryolo_train_v1_7_4() (in module transphire.transphire_content)
default_cryolo_v1_0_4() (in module transphire.transphire_content)
default_cryolo_v1_1_0() (in module transphire.transphire_content)
default_cryolo_v1_2_1() (in module transphire.transphire_content)
default_cryolo_v1_4_1() (in module transphire.transphire_content)
default_cryolo_v1_5_8() (in module transphire.transphire_content)
default_cter_v1_0() (in module transphire.transphire_content)
default_ctffind_4_v4_1_8() (in module transphire.transphire_content)
default_font() (in module transphire.transphire_content)
default_gctf_v1_06() (in module transphire.transphire_content)
default_gctf_v1_18() (in module transphire.transphire_content)
default_general() (in module transphire.transphire_content)
default_global() (in module transphire.transphire_content)
default_input() (in module transphire.transphire_content)
default_isac2_1_2() (in module transphire.transphire_content)
default_motion_cor_2_v1_0_0() (in module transphire.transphire_content)
default_motion_cor_2_v1_0_5() (in module transphire.transphire_content)
default_motion_cor_2_v1_1_0() (in module transphire.transphire_content)
default_motion_cor_2_v1_3_0() (in module transphire.transphire_content)
default_mount() (in module transphire.transphire_content)
default_notification() (in module transphire.transphire_content)
default_notification_widget() (in module transphire.transphire_content)
default_others() (in module transphire.transphire_content)
default_path() (in module transphire.transphire_content)
default_pipeline() (in module transphire.transphire_content)
default_unblur_v1_0_0() (in module transphire.transphire_content)
default_window_1_2() (in module transphire.transphire_content)
DefaultSettings (class in transphire.loadwindow)
delete (transphire.framewidget.FrameWidget attribute)
(transphire.loadcontent.LoadContent attribute)
delete_file_to_delete() (transphire.processthread.ProcessThread static method)
do_data_reset() (transphire.plotwidget.PlotWidget method)
dummy() (in module transphire.transphire_import)
(in module transphire.transphire_plot)
E
EmailDialog (class in transphire.emaildialog)
emit_global() (transphire.settingscontainer.SettingsContainer method)
emit_plot_signals() (transphire.processworker.ProcessWorker method)
emit_signals() (transphire.settingscontainer.SettingsContainer method)
enable() (transphire.framecontainer.FrameContainer method)
(transphire.mainwindow.MainWindow method)
(transphire.mountcontainer.MountContainer method)
(transphire.notificationcontainer.NotificationContainer method)
(transphire.plotcontainer.PlotContainer method)
(transphire.settingscontainer.SettingsContainer method)
enable_tab() (transphire.tabdocker.TabDocker method)
enlarge() (transphire.settingswidget.SettingsWidget method)
eventFilter() (transphire.plotcontainer.PlotContainer method)
extract_time_and_grid_information() (in module transphire.transphire_software)
F
file_to_distribute() (transphire.processthread.ProcessThread method)
fill_content() (transphire.mainwindow.MainWindow method)
fill_default_dict() (transphire.loadwindow.DefaultSettings method)
fill_quota_project_and_scratch() (transphire.mountworker.MountWorker method)
fill_spot_dict() (transphire.processworker.ProcessWorker method)
filter_combo() (transphire.plotwidget.SelectWidget method)
find_all_files() (in module transphire.transphire_software)
find_best_match() (in module transphire.transphire_utils)
find_frames() (in module transphire.transphire_software)
find_latest_version() (in module transphire.transphire_utils)
find_logfiles() (in module transphire.transphire_class2d)
(in module transphire.transphire_ctf)
(in module transphire.transphire_extract)
(in module transphire.transphire_picking)
(in module transphire.transphire_select2d)
find_related_frames_to_jpg() (in module transphire.transphire_software)
force_update() (transphire.plotwidget.PlotWidget method)
FrameContainer (class in transphire.framecontainer)
FrameWidget (class in transphire.framewidget)
G
get_apply() (transphire.loadwindow.DefaultSettings method)
get_color() (in module transphire.transphire_utils)
get_combo_entries() (transphire.settingswidget.SettingsWidget method)
get_constant_value() (in module transphire.transphire_ctf)
get_content_default() (transphire.loadwindow.DefaultSettings static method)
get_content_gui() (in module transphire.transphire_utils)
get_copy_command_for_frames() (in module transphire.transphire_software)
get_ctf_command() (in module transphire.transphire_ctf)
get_current_global() (transphire.settingswidget.SettingsWidget method)
get_df() (transphire.transphire_utils.DataFrame method)
get_dtype_dict() (in module transphire.transphire_import)
get_dtype_import_dict() (in module transphire.transphire_import)
get_dw_file_name() (in module transphire.transphire_motion)
get_dws_file_name() (in module transphire.transphire_motion)
get_email() (transphire.emaildialog.EmailDialog method)
get_exclude_set_path() (in module transphire.transphire_utils)
get_extract_command() (in module transphire.transphire_extract)
get_folder_size() (transphire.mountcalculator.MountCalculator method)
get_function_dict() (in module transphire.transphire_utils)
get_gtg_info() (transphire.processthread.ProcessThread static method)
get_hash() (transphire.processthread.ProcessThread static method)
get_header() (in module transphire.transphire_import)
get_index_where() (transphire.transphire_utils.DataFrame method)
get_indicator() (transphire.logviewer.LogViewer method)
get_input_names() (transphire.settingscontainer.SettingsContainer method)
get_key_names() (in module transphire.transphire_utils)
get_logfiles() (in module transphire.transphire_software)
get_mic_number() (in module transphire.transphire_plot)
get_motion_command() (in module transphire.transphire_motion)
get_motion_default() (in module transphire.transphire_motion)
get_name() (in module transphire.transphire_utils)
(transphire.emaildialog.EmailDialog method)
get_particle_number() (in module transphire.transphire_extract)
get_picking_command() (in module transphire.transphire_picking)
get_quota_quota_command() (transphire.mountcalculator.MountCalculator static method)
get_relion_dict() (in module transphire.transphire_import)
get_relion_header() (in module transphire.transphire_ctf)
(in module transphire.transphire_motion)
get_restart_dict() (transphire.inputbox.InputBox method)
get_select2d_command() (in module transphire.transphire_select2d)
get_settings() (transphire.framecontainer.FrameContainer method)
(transphire.framewidget.FrameWidget method)
(transphire.loadcontent.LoadContent method)
(transphire.loadcontentcontainer.LoadContentContainer method)
(transphire.mountcontainer.MountContainer method)
(transphire.mountwidget.MountWidget method)
(transphire.notificationcontainer.NotificationContainer method)
(transphire.notificationwidget.NotificationWidget method)
(transphire.settingscontainer.SettingsContainer method)
(transphire.settingswidget.SettingsWidget method)
get_settings_tab() (transphire.loadcontentcontainer.LoadContentContainer method)
get_settings_widget() (transphire.loadcontentcontainer.LoadContentContainer method)
get_ssh_quota() (transphire.mountcalculator.MountCalculator method)
get_start_settings() (transphire.mainwindow.MainWindow method)
get_style() (in module transphire.transphire_utils)
get_telegram_messages() (transphire.notificationcontainer.NotificationContainer method)
get_telegram_user() (transphire.notificationcontainer.NotificationContainer method)
get_transphire_dict() (in module transphire.transphire_import)
get_unique_types() (in module transphire.transphire_utils)
get_value() (transphire.plotwidget.SelectWidget method)
get_values() (transphire.plotwidget.TrimWidget method)
(transphire.transphire_utils.DataFrame method)
get_x_dim() (in module transphire.transphire_software)
get_xml_info() (transphire.processthread.ProcessThread static method)
getText() (transphire.inputbox.InputBox method)
H
handle_change() (transphire.plotwidget.SelectWidget method)
handle_check() (transphire.inputbox.InputBox method)
handle_show() (transphire.plotcontainer.TwinContainer method)
hide_marker() (transphire.plotwidget.PlotWidget method)
hide_show_widget() (transphire.separator.Separator method)
hide_tab() (transphire.mainwindow.MainWindow method)
hide_twin() (transphire.plotwidget.PlotWidget method)
high_res() (transphire.plotwidget.PlotWidget static method)
I
import_auto_sphire_v1_3() (in module transphire.transphire_import)
import_cinderella_v0_3_1() (in module transphire.transphire_import)
import_cryolo_v1_0_4() (in module transphire.transphire_import)
import_cryolo_v1_2_2() (in module transphire.transphire_import)
import_cryolo_v1_8_0() (in module transphire.transphire_import)
import_cter_v1_0() (in module transphire.transphire_import)
import_ctffind_v4_1_8() (in module transphire.transphire_import)
import_gctf_v1_06() (in module transphire.transphire_import)
import_isac_v1_2() (in module transphire.transphire_import)
import_motion_cor_2_v1_0_0() (in module transphire.transphire_import)
import_unblur_v1_0_0() (in module transphire.transphire_import)
import_window_v1_2() (in module transphire.transphire_import)
increment_indicator() (transphire.logviewer.LogViewer method)
indexOf() (transphire.tabdocker.TabDocker method)
InputBox (class in transphire.inputbox)
is_higher_version() (in module transphire.transphire_utils)
is_in_content() (transphire.loadwindow.DefaultSettings method)
L
latest_active (transphire.tabdocker.TabDocker attribute)
LifoQueue() (transphire.processworker.MyManager method)
load() (transphire.mainwindow.MainWindow method)
load_df() (transphire.transphire_utils.DataFrame method)
load_save() (transphire.mountworker.MountWorker method)
load_template() (transphire.loadwindow.DefaultSettings method)
LoadContent (class in transphire.loadcontent)
LoadContentContainer (class in transphire.loadcontentcontainer)
LogViewer (class in transphire.logviewer)
LogViewerDialog (class in transphire.logviewerdialog)
look_and_feel() (in module transphire.transphire_utils)
look_and_feel_small() (in module transphire.transphire_utils)
lost_connection() (transphire.processthread.ProcessThread method)
M
MainWindow (class in transphire.mainwindow)
message() (in module transphire.transphire_utils)
MessageBox (class in transphire.messagebox)
mkdir_p() (in module transphire.transphire_utils)
mkdir_p_as_another_user() (transphire.processthread.ProcessThread method)
monitor() (transphire.mainwindow.MainWindow method)
mount() (transphire.mountwidget.MountWidget method)
(transphire.mountworker.MountWorker method)
mount_hdd() (transphire.mountworker.MountWorker method)
MountCalculator (class in transphire.mountcalculator)
MountContainer (class in transphire.mountcontainer)
MountWidget (class in transphire.mountwidget)
MountWorker (class in transphire.mountworker)
mouse_twin_event() (transphire.plotcontainer.TwinContainer method)
MplCanvas (class in transphire.plotwidget)
MplCanvasWidget (class in transphire.plotwidget)
my_click_event() (transphire.logviewer.LogViewer method)
MyManager (class in transphire.processworker)
MyTabBar (class in transphire.tabdocker)
N
new_round_plot() (transphire.mainwindow.MainWindow method)
normalize_image() (in module transphire.transphire_utils)
NotificationContainer (class in transphire.notificationcontainer)
NotificationWidget (class in transphire.notificationwidget)
O
order_tabs() (transphire.tabdocker.TabDocker method)
P
paintEvent() (transphire.tabdocker.MyTabBar method)
PasswordDialog (class in transphire.passworddialog)
PlotContainer (class in transphire.plotcontainer)
PlotWidget (class in transphire.plotwidget)
PlotWorker (class in transphire.plotworker)
postprocess_content() (transphire.mainwindow.MainWindow method)
pre_check_programs() (transphire.processworker.ProcessWorker method)
prefill_queue() (transphire.processworker.ProcessWorker method)
prepare_axes() (transphire.plotwidget.PlotWidget method)
prepare_send_adjust() (transphire.settingscontainer.SettingsContainer method)
ProcessThread (class in transphire.processthread)
ProcessWorker (class in transphire.processworker)
Q
question() (in module transphire.transphire_utils)
R
rebin() (in module transphire.transphire_utils)
recursive_clear() (transphire.loadwindow.DefaultSettings method)
recursive_file_search() (in module transphire.transphire_class2d)
(in module transphire.transphire_ctf)
(in module transphire.transphire_extract)
recursive_search() (transphire.processthread.ProcessThread method)
(transphire.settingscontainer.SettingsContainer static method)
reduce_copy_entries() (in module transphire.transphire_utils)
reduce_path_widget() (in module transphire.transphire_utils)
reduce_programs() (in module transphire.transphire_utils)
refresh_quota() (transphire.mountworker.MountWorker method)
(transphire.statuscontainer.StatusContainer method)
remove_from_queue() (transphire.processthread.ProcessThread method)
remove_from_queue_file() (transphire.processthread.ProcessThread method)
remove_from_translate() (transphire.processthread.ProcessThread method)
remove_template() (transphire.templatedialog.TemplateDialog method)
remove_widget() (transphire.loadcontentcontainer.LoadContentContainer method)
removeTab() (transphire.tabdocker.TabDocker method)
rerun_function_in_case_of_error() (in module transphire.transphire_utils)
reset_gui() (transphire.mainwindow.MainWindow method)
reset_list() (transphire.plotworker.PlotWorker method)
reset_plain_text() (transphire.logviewer.LogViewer method)
reset_plot() (transphire.plotcontainer.PlotContainer method)
reset_queue() (transphire.processthread.ProcessThread method)
reset_values() (transphire.plotwidget.SelectWidget method)
(transphire.plotwidget.TrimWidget method)
run() (transphire.processthread.ProcessThread method)
(transphire.processworker.ProcessWorker method)
run_auto3d() (transphire.processthread.ProcessThread method)
run_class2d() (transphire.processthread.ProcessThread method)
run_command() (transphire.processthread.ProcessThread method)
run_compress() (transphire.processthread.ProcessThread method)
run_copy_extern() (transphire.processthread.ProcessThread method)
run_ctf() (transphire.processthread.ProcessThread method)
run_extract() (transphire.processthread.ProcessThread method)
run_find() (transphire.processthread.ProcessThread method)
run_import() (transphire.processthread.ProcessThread method)
run_in_parallel() (transphire.processworker.ProcessWorker static method)
run_monitor() (transphire.processworker.ProcessWorker method)
run_motion() (transphire.processthread.ProcessThread method)
run_picking() (transphire.processthread.ProcessThread method)
run_process() (transphire.processworker.ProcessWorker method)
run_select2d() (transphire.processthread.ProcessThread method)
run_software_meta() (transphire.processthread.ProcessThread method)
run_train2d() (transphire.processthread.ProcessThread method)
S
save() (transphire.mainwindow.MainWindow method)
save_df() (transphire.transphire_utils.DataFrame method)
save_settings() (transphire.loadcontentcontainer.LoadContentContainer method)
save_temp_settings() (transphire.mainwindow.MainWindow method)
search_for_projects() (transphire.settingscontainer.SettingsContainer method)
select_tab() (transphire.plotcontainer.PlotContainer method)
SelectWidget (class in transphire.plotwidget)
send_data() (transphire.plotworker.PlotWorker method)
send_notification() (transphire.notificationcontainer.NotificationContainer method)
send_out_of_range_error() (transphire.processthread.ProcessThread method)
send_to_user() (transphire.notificationcontainer.NotificationContainer method)
Separator (class in transphire.separator)
set_central_widget() (transphire.mainwindow.MainWindow method)
set_current_folder() (transphire.mountwidget.MountWidget method)
set_current_image_name() (transphire.plotwidget.PlotWidget method)
set_design() (transphire.mainwindow.MainWindow method)
(transphire.settingscontainer.SettingsContainer method)
set_df() (transphire.transphire_utils.DataFrame method)
set_floating() (transphire.plotcontainer.PlotContainer method)
set_global() (transphire.settingscontainer.SettingsContainer method)
set_layout_structure() (transphire.mainwindow.MainWindow method)
set_new_model() (transphire.settingscontainer.SettingsContainer method)
set_project_path() (transphire.logviewer.LogViewer method)
set_settings() (transphire.framecontainer.FrameContainer method)
(transphire.loadcontent.LoadContent method)
(transphire.loadcontentcontainer.LoadContentContainer method)
(transphire.mainwindow.MainWindow method)
(transphire.mountworker.MountWorker method)
(transphire.notificationcontainer.NotificationContainer method)
(transphire.notificationwidget.NotificationWidget method)
(transphire.plotwidget.PlotWidget method)
(transphire.plotworker.PlotWorker method)
(transphire.settingscontainer.SettingsContainer method)
(transphire.settingswidget.SettingsWidget method)
set_state() (transphire.plotwidget.TrimWidget method)
set_thread_object() (transphire.mountwidget.MountWidget method)
set_threadlist() (transphire.mountcontainer.MountContainer method)
set_type() (transphire.inputbox.InputBox method)
set_values() (transphire.plotwidget.SelectWidget method)
(transphire.plotwidget.TrimWidget method)
(transphire.transphire_utils.DataFrame method)
set_visibility() (transphire.plotcontainer.PlotContainer method)
set_visualisation() (transphire.mainwindow.MainWindow method)
setCurrentIndex() (transphire.tabdocker.TabDocker method)
setCurrentWidget() (transphire.tabdocker.TabDocker method)
setDefault() (transphire.inputbox.InputBox method)
(transphire.messagebox.MessageBox method)
setMovable() (transphire.tabdocker.TabDocker method)
setTabEnabled() (transphire.tabdocker.TabDocker method)
setTabPosition() (transphire.tabdocker.TabDocker method)
setTabText() (transphire.tabdocker.TabDocker method)
setText() (transphire.inputbox.InputBox method)
(transphire.messagebox.MessageBox method)
settings_to_dict() (transphire.mainwindow.MainWindow static method)
SettingsContainer (class in transphire.settingscontainer)
SettingsWidget (class in transphire.settingswidget)
setup_values() (transphire.plotwidget.PlotWidget method)
shift_to_contrast() (in module transphire.transphire_ctf)
sig_add_save (transphire.mountworker.MountWorker attribute)
sig_adjust_tab (transphire.settingscontainer.SettingsContainer attribute)
sig_calculate (transphire.plotworker.PlotWorker attribute)
sig_calculate_df_quota (transphire.mountworker.MountWorker attribute)
sig_calculate_get_quota (transphire.mountworker.MountWorker attribute)
sig_calculate_ssh_quota (transphire.mountworker.MountWorker attribute)
sig_change_info_name (transphire.statuswidget.StatusWidget attribute)
sig_change_info_quota (transphire.statuswidget.StatusWidget attribute)
sig_change_use_movie (transphire.settingscontainer.SettingsContainer attribute)
sig_data (transphire.plotworker.PlotWorker attribute)
sig_error (transphire.mountworker.MountWorker attribute)
(transphire.processworker.ProcessWorker attribute)
sig_finished (transphire.mountcalculator.MountCalculator attribute)
(transphire.processworker.ProcessWorker attribute)
sig_hide (transphire.plotwidget.TrimWidget attribute)
(transphire.plotwidget.ViewWidget attribute)
sig_index_changed (transphire.settingswidget.SettingsWidget attribute)
sig_info (transphire.mountworker.MountWorker attribute)
sig_load_save (transphire.mountworker.MountWorker attribute)
sig_mount (transphire.mountworker.MountWorker attribute)
sig_mount_hdd (transphire.mountworker.MountWorker attribute)
sig_new_round (transphire.plotworker.PlotWorker attribute)
sig_notification (transphire.mountworker.MountWorker attribute)
(transphire.processworker.ProcessWorker attribute)
sig_quota (transphire.mountworker.MountWorker attribute)
sig_refresh (transphire.mountworker.MountWorker attribute)
sig_refresh_quota (transphire.statuscontainer.StatusContainer attribute)
sig_reset (transphire.mainwindow.MainWindow attribute)
(transphire.plotworker.PlotWorker attribute)
sig_reset_list (transphire.plotworker.PlotWorker attribute)
sig_set_folder (transphire.mountworker.MountWorker attribute)
sig_set_project_directory (transphire.processworker.ProcessWorker attribute)
sig_set_settings (transphire.mountworker.MountWorker attribute)
sig_set_state (transphire.plotwidget.TrimWidget attribute)
sig_set_visual (transphire.plotworker.PlotWorker attribute)
sig_start (transphire.processworker.ProcessWorker attribute)
sig_start_plot (transphire.tabdocker.TabDocker attribute)
sig_status (transphire.processworker.ProcessWorker attribute)
sig_stop (transphire.notificationcontainer.NotificationContainer attribute)
sig_success (transphire.mountworker.MountWorker attribute)
sig_twin (transphire.plotwidget.MplCanvas attribute)
sig_umount (transphire.mountworker.MountWorker attribute)
sig_update (transphire.plotwidget.SelectWidget attribute)
(transphire.plotwidget.TrimWidget attribute)
sig_visible (transphire.plotworker.PlotWorker attribute)
signal_plot (transphire.processworker.ProcessWorker attribute)
split_maximum() (in module transphire.transphire_utils)
start() (transphire.mainwindow.MainWindow method)
start_plotting() (transphire.plotwidget.PlotWidget method)
start_queue() (transphire.processthread.ProcessThread method)
start_queue_find() (transphire.processthread.ProcessThread method)
start_queue_meta() (transphire.processthread.ProcessThread method)
start_threads() (transphire.mainwindow.MainWindow method)
StatusContainer (class in transphire.statuscontainer)
StatusWidget (class in transphire.statuswidget)
stop() (transphire.mainwindow.MainWindow method)
stop_dialog() (transphire.mainwindow.MainWindow method)
submit_text() (transphire.logviewer.LogViewer method)
symlink_rel() (in module transphire.transphire_utils)
synchronize_tabs() (transphire.plotcontainer.PlotContainer method)
T
TabDocker (class in transphire.tabdocker)
tabSizeHint() (transphire.tabdocker.MyTabBar method)
tabText() (transphire.tabdocker.TabDocker method)
TemplateDialog (class in transphire.templatedialog)
thread_safe() (in module transphire.transphire_utils)
to_partres_file() (in module transphire.transphire_ctf)
to_star_file() (in module transphire.transphire_ctf)
tooltip_style() (in module transphire.transphire_utils)
transphire (module)
transphire.emaildialog (module)
transphire.framecontainer (module)
transphire.framewidget (module)
transphire.inputbox (module)
transphire.loadcontent (module)
transphire.loadcontentcontainer (module)
transphire.loadwindow (module)
transphire.logviewer (module)
transphire.logviewerdialog (module)
transphire.mainwindow (module)
transphire.messagebox (module)
transphire.mountcalculator (module)
transphire.mountcontainer (module)
transphire.mountwidget (module)
transphire.mountworker (module)
transphire.notificationcontainer (module)
transphire.notificationwidget (module)
transphire.passworddialog (module)
transphire.plotcontainer (module)
transphire.plotwidget (module)
transphire.plotworker (module)
transphire.processthread (module)
transphire.processworker (module)
transphire.separator (module)
transphire.settingscontainer (module)
transphire.settingswidget (module)
transphire.statuscontainer (module)
transphire.statuswidget (module)
transphire.support_scripts (module)
transphire.tabdocker (module)
transphire.templatedialog (module)
transphire.transphire_class2d (module)
transphire.transphire_content (module)
transphire.transphire_ctf (module)
transphire.transphire_extract (module)
transphire.transphire_import (module)
transphire.transphire_motion (module)
transphire.transphire_picking (module)
transphire.transphire_plot (module)
transphire.transphire_select2d (module)
transphire.transphire_software (module)
transphire.transphire_train2d (module)
transphire.transphire_utils (module)
TrimWidget (class in transphire.plotwidget)
try_write() (transphire.processthread.ProcessThread static method)
TwinContainer (class in transphire.plotcontainer)
U
umount() (transphire.mountwidget.MountWidget method)
(transphire.mountworker.MountWorker method)
update() (transphire.notificationcontainer.NotificationContainer method)
update_batch() (in module transphire.transphire_plot)
update_combo() (transphire.notificationwidget.NotificationWidget method)
update_cryolo_v1_0_4() (in module transphire.transphire_plot)
update_ctf() (in module transphire.transphire_plot)
update_data() (transphire.plotwidget.PlotWidget method)
update_email() (transphire.notificationcontainer.NotificationContainer method)
update_figure() (transphire.plotcontainer.PlotContainer method)
(transphire.plotwidget.PlotWidget method)
update_global() (transphire.settingscontainer.SettingsContainer method)
update_helpers() (transphire.plotwidget.PlotWidget method)
update_histogram() (transphire.plotwidget.PlotWidget method)
update_image() (transphire.plotwidget.PlotWidget method)
update_image_plot() (transphire.plotwidget.PlotWidget method)
update_label() (transphire.plotwidget.ViewWidget method)
update_labels() (transphire.plotwidget.MplCanvasWidget method)
update_micrograph() (in module transphire.transphire_plot)
update_motion() (in module transphire.transphire_plot)
update_plain_text() (transphire.logviewer.LogViewer method)
update_telegram() (transphire.notificationcontainer.NotificationContainer method)
update_trim() (transphire.plotwidget.PlotWidget method)
update_values() (transphire.plotwidget.PlotWidget method)
V
value_in_column() (transphire.transphire_utils.DataFrame method)
ViewWidget (class in transphire.plotwidget)
W
wait() (transphire.processthread.ProcessThread method)
widget() (transphire.tabdocker.TabDocker method)
write_error() (transphire.processthread.ProcessThread method)
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